96 publications

2017

• Tommasi, D., Stock, C. A., Hobday, A. J., Methot, R., Kaplan, I. C., Eveson, J. P., ... Werner, F. E. (2017). Managing living marine resources in a dynamic environment: The role of seasonal to decadal climate forecasts. Progress in Oceanography, 152, 15-49. doi: 10.1016/j.pocean.2016.12.011

2016

• Collie, J. S., Botsford, L. W., Hastings, A., Kaplan, I. C., Largier, J. L., Livingston, P. A., ... Werner, F. E. (2016). Ecosystem models for fisheries management: finding the sweet spot. Fish and Fisheries, 17(1), 101-125. doi: 10.1111/faf.12093

2015

• Rose, K. A., Fiechter, J., Curchitser, E. N., Hedstrom, K., Bernal, M., Creekmore, S., ... Agostini, V. (2015). Demonstration of a fully-coupled end-to-end model for small pelagic fish using sardine and anchovy in the California Current. Progress in Oceanography, 138, 348-380. doi: 10.1016/j.pocean.2015.01.012

2014

• Levin, P. S., Kelble, C. R., Shuford, R. L., Ainsworth, C., deReynier, Y., Dunsmore, R., ... Werner, F. (2014). Guidance for implementation of integrated ecosystem assessments: a US perspective. ICES Journal of Marine Science, 71(5), 1198-1204. doi: 10.1093/icesjms/fst112

2013

• Fogarty, M. J., Botsford, L. W., & Werner, F. E. (2013). Legacy of the US GLOBEC program: current and potential contributions to marine ecosystem-based management. Oceanography, 26(4), 116-127. doi: 10.5670/oceanog.2013.79

2011

• Kishi, M. J., Ito, S., Megrey, B. A., Rose, K. A., & Werner, F. E. (2011). A review of the NEMURO and NEMURO.FISH models and their application to marine ecosystem investigations. Journal of Oceanography, 67(1), 3-16. doi: 10.1007/s10872-011-0009-4
• Stock, C. A., Alexander, M. A., Bond, N. A., Brander, K. M., Cheung, W. W. L., Curchitser, E. N., ... Werner, F. E. (2011). On the use of IPCC-class models to assess the impact of climate on Living Marine Resources. Progress in Oceanography, 88(1-4), 1-27. doi: 10.1016/j.pocean.2010.09.001
• Barange, M., Allen, I., Allison, E. C., Badjeck, M., Blanchard, J., Drakeford, B., ... Werner, F. (2011). Predicting the impacts and socio-economic consequences of climate change on global marine exosystems and fisheries: the QUEST_Fish Framework. World fisheries : a social-ecological analysis (pp. 31-59). Ames, Iowa Chichester, West Sussex, UK: Wiley-Blackwell.

2010

• Perry, R. I., Ommer, R. E., Barange, M., & Werner, F. (2010). The challenge of adapting marine social-ecological systems to the additional stress of climate change. Current Opinion in Environmental Sustainability, 2(5-6), 356-363. doi: 10.1016/j.cosust.2010.10.004
• McGillicuddy, D. J., deYoung, B., Doney, S. C., Glibert, P. M., Stammer, D., & Werner, F. E. (2010). Models: Tools for synthesis in international oceanographic research programs. Oceanography, 23(3), 126-139. doi: 10.5670/oceanog.2010.28
• Hofmann, E. E., Barange, M., Field, J. G., Harris, R. P., Perry, R. I., & Werner, F. E. (2010). Marine ecosystems and global change: a synthesis. New York: Oxford University Press.
• deYoung, B., Werner, F. E., Batchelder, H., Carlotti, F., Fiksen, O., Hofmann, E. E., ... Yamazaki, H. (2010). Dynamics of marine ecosystems: integration through models of physical-biological interactions. New York: Oxford University Press.

2009

• Chassignet, E. P., Hurlburt, H. E., Metzger, E. J., Smedstad, O. M., Cummings, J. A., Halliwell, G. R., ... Wilkin, J. (2009). US GODAE Global Ocean Prediction with the HYbrid Coordinate Ocean Model (HYCOM). Oceanography, 22(2), 64-75. doi: 10.5670/oceanog.2009
• Kristiansen, T., Lough, R. G., Werner, F. E., Broughton, E. A., & Buckley, L. J. (2009). Individual-based modeling of feeding ecology and prey selection of larval cod on Georges Bank. Marine Ecology Progress Series, 376, 227-243. doi: 10.3354/meps07796
• Freon, P., Werner, F., & Chavez, F. P. (2009). Conjectures on future climate effects on marine ecosystems dominated by small pelagic fish. Climate Change and Small Pelagic Fish, 312-343.

2008

• deYoung, B., Barange, M., Beaugrand, G., Harris, R., Perry, R. I., Scheffer, M., & Werner, F. (2008). Regime shifts in marine ecosystems: detection, prediction and management. Trends in Ecology & Evolution, 23(7), 402-409. doi: 10.1016/j.tree.2008.03.008
• Rose, K. A., Megrey, B. A., Hay, D., Werner, F., & Schweigert, J. (2008). Climate regime effects on Pacific herring growth using coupled nutrient-phytoplankton-zooplankton and bioenergetics models. Transactions of the American Fisheries Society, 137(1), 278-297. doi: 10.1577/t05-152.1
• Edwards, K. P., Hare, J. A., & Werner, F. E. (2008). Dispersal of black sea bass (Centropristis striata) larvae on the southeast US continental shelf: results of a coupled vertical larval behavior - 3D circulation model. Fisheries Oceanography, 17(4), 299-315. doi: 10.1111/j.1365-2419.2008.00480.x

2007

• Cowen, R. K., Gawarkiewic, G., Pineda, J., Thorrold, S. R., & Werner, F. E. (2007). Population connectivity in marine systems an overview. Oceanography, 20(3), 14-21. doi: 10.5670/oceanog.2007.26
• Werner, F. E., Cowen, R. K., & Paris, C. B. (2007). Coupled biological and physical models present capabilities and necessary developments for future studies of population connectivity. Oceanography, 20(3), 54-69. doi: 10.5670/oceanog.2007.29
• Aretxabaleta, A., Blanton, B. O., Seim, H. E., Werner, F. E., Nelson, J. R., & Chassignet, E. P. (2007). Cold event in the South Atlantic Bight during summer of 2003: Model simulations and implications. Journal of Geophysical Research-Oceans, 112(C5). doi: 10.1029/2006jc003903
• Greenberg, D. A., Dupont, F., Lyard, F. H., Lynch, D. R., & Werner, F. E. (2007). Resolution issues in numerical models of oceanic and coastal circulation. Continental Shelf Research, 27(9), 1317-1343. doi: 10.1016/j.csr.2007.01.023
• Rose, K. A., Megrey, B. A., Werner, F. E., & Ware, D. M. (2007). Calibration of the NEMURO nutrient-phytoplankton-zooplankton food web model to a coastal ecosystem: Evaluation of an automated calibration approach. Ecological Modelling, 202(1-2), 38-51. doi: 10.1016/j.ecolmodel.2006.08.016
• Rose, K. A., Werner, F. E., Megrey, B. A., Aita, M. N., Yamanaka, Y., Hay, D. E., ... Foster, M. B. (2007). Simulated herring growth responses in the Northeastern Pacific to historic temperature and zooplankton conditions generated by the 3-dimensional NEMURO nutrient-phytoplankton-zooplankton model. Ecological Modelling, 202(1-2), 184-195. doi: 10.1016/j.ecolmodel.2006.06.020
• Kishi, M. J., Kashiwai, M., Ware, D. M., Megrey, B. A., Eslinger, D. L., Werner, F. E., ... Zvalinsky, V. I. (2007). NEMURO - a lower trophic level model for the North Pacific marine ecosystem. Ecological Modelling, 202(1-2), 12-25. doi: 10.1016/j.ecolmodel.2006.08.021
• Megrey, B. A., Rose, K. A., Klumb, R. A., Hay, D. E., Werner, F. E., Eslinger, D. L., & Smith, S. L. (2007). A bioenergetlics-based population dynamics model of Pacific herring (Clupea harengus pallasi) coupled to a lower trophic level nutrient-phytoplankton-zooplankton model: Description, calibration, and sensitivity analysis. Ecological Modelling, 202(1-2), 144-164. doi: 10.1016/j.ecolmodel.2006.08.020
• Werner, F. E., Ito, S., Megrey, B. A., & Kishi, M. J. (2007). Synthesis of the NEMURO model studies and future directions of marine ecosystem modeling. Ecological Modelling, 202(1-2), 211-223. doi: 10.1016/j.ecolmodel.2006.08.019
• Megrey, B. A., Rose, K. A., Ito, S., Hay, D. E., Werner, F. E., Yamanaka, Y., & Aita, M. N. (2007). North Pacific basin-scale differences in lower and higher trophic level marine ecosystem responses to climate impacts using a nutrient-phytoplankton-zooplankton model coupled to a fish bioenergetics model. Ecological Modelling, 202(1-2), 196-210. doi: 10.1016/j.ecolmodel.2006.08.018
• Edwards, K. P., Hare, J. A., Werner, F. E., & Seim, H. (2007). Using 2-dimensional dispersal kernels to identify the dominant influences on larval dispersal on continental shelves. Marine Ecology Progress Series, 352, 77-87. doi: 10.3354/meps07169

2006

• Morales-Zarate, M. V., Aretxabaleta, A. L., Werner, F. E., & Lluch-Cota, S. E. (2006). Modeling winter circulation and particle retention in the Magdalena-Almejas Bay lagoon system (Baja California Sur, Mexico). Ciencias Marinas, 32(4), 631-647.
• Edwards, K. P., Werner, F. E., & Blanton, B. O. (2006). Comparison of observed and modeled drifter trajectories in coastal regions: An improvement through adjustments for observed drifter slip and errors in wind fields. Journal of Atmospheric and Oceanic Technology, 23(11), 1614-1620. doi: 10.1175/jtech1933.1
• Lehodey, P., Alheit, J., Barange, M., Baumgartner, T., Beaugrand, G., Drinkwater, K., ... Werner, F. (2006). Climate variability, fish, and fisheries. Journal of Climate, 19(20), 5009-5030. doi: 10.1175/jcli3898.1
• Edwards, K. P., Hare, J. A., Werner, F. E., & Blanton, B. O. (2006). Lagrangian circulation on the southeast US continental shelf: implications for larval dispersal and retention. Continental Shelf Research, 26(12-13), 1375-1394. doi: 10.1016/j.csr.2006.01.020
• Aretxabaleta, A., Nelson, J. R., Blanton, J. O., Seim, H. E., Werner, F. E., Bane, J. M., & Weisberg, R. (2006). Cold event in the South Atlantic Bight during summer of 2003: Anomalous hydrographic and atmospheric conditions. Journal of Geophysical Research-Oceans, 111(C6). doi: 10.1029/2005jc003105
• Redfern, J. V., Ferguson, M. C., Becker, E. A., Hyrenbach, K. D., Good, C., Barlow, J., ... Werner, F. (2006). Techniques for cetacean-habitat modeling. Marine Ecology-Progress Series, 310, 271-295. doi: 10.3354/meps310271
• Lough, R. G., Broughton, E. A., Buckley, L. J., Incze, L. S., Edwards, K. P., Converse, R., ... Werner, F. E. (2006). Modeling growth of Atlantic cod larvae on the southern flank of Georges Bank in the tidal-front circulation during May 1999. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 53(23-24), 2771-2788. doi: 10.1016/j.dsr2.2006.08.012

2005

• Bogazzi, E., Baldoni, A., Rivas, A., Martos, P., Reta, R., Orensanz, J. M., ... Werner, F. (2005). Spatial correspondence between areas of concentration of Patagonian scallop (Zygochlamys patagonica) and frontal systems in the southwestern Atlantic. Fisheries Oceanography, 14(5), 359-376. doi: 10.1111/j.1365-2419.2005.00340.x
• Orfila, A., Jordi, A., Basterretxea, G., Vizoso, G., Marba, N., Duarte, C. M., ... Tintore, J. (2005). Residence time and Posidonia oceanica in Cabrera Archipelago National Park, Spain. Continental Shelf Research, 25(11), 1339-1352. doi: 10.1016/j.csr.2005.01.004
• Lough, R. G., Buckley, L. J., Werner, F. E., Quinlan, J. A., & Edwards, K. P. (2005). A general biophysical model of larval cod (Gadus morhua) growth applied to populations on Georges Bank. Fisheries Oceanography, 14(4), 241-262. doi: 10.1111/j.1365-2419.2005.00330.x
• Aretxabaleta, A., Manning, J., Werner, F. E., Smith, K., Blanton, B. O., & Lynch, D. R. (2005). Data assimilative hindcast on the Southern Flank of Georges Bank during May 1999: frontal circulation and implications. Continental Shelf Research, 25(7-8), 849-874. doi: 10.1016/j.csr.2004.09.024
• Runge, J. A., Franks, P. J. S., Gentleman, W. C., Megrey, B. A., Rose, K. A., Werner, F. E., & Zakardjian, B. (2005). Diagnosis and prediction of variability in secondary production and fish recruitment processes: developments in physical-biological modelling. The global coastal ocean: multiscale interdisciplinary processes (pp. 413-473). Cambridge, Mass.: Harvard University Press.

2004

• Ito, S., Kishi, M. J., Kurita, Y., Oozeki, Y., Yamanaka, Y., Megrey, B. A., & Werner, F. E. (2004). Initial design for a fish bioenergetics model of Pacific saury coupled to a lower trophic ecosystem model. Fisheries Oceanography, 13, 111-124. doi: 10.1111/j.1365-2419.2004.00307.x
• Lynch, D., Smith, K., Blanton, B., Luettich, R., & Werner, F. (2004). Forecasting the coastal ocean: Resolution, tide, and operational data in the South Atlantic Bight. Journal of Atmospheric and Oceanic Technology, 21(7), 1074-1085. doi: 10.1175/1520-0426(2004)021<1074:ftcort>2.0.co;2
• deYoung, B., Heath, M., Werner, F., Chai, F., Megrey, B., & Monfray, P. (2004). Challenges of Modeling ocean basin ecosystems. Science, 304(5676), 1463-1466. doi: 10.1126/science.1094858
• Blanton, B. O., Werner, F. E., Seim, H. E., Luettich, R. A., Lynch, D. R., Smith, K. W., ... Way, F. (2004). Barotropic tides in the South Atlantic Bight. Journal of Geophysical Research: Oceans, 109(C12), n/a-n/a. doi: 10.1029/2004JC002455
• Werner, F. E., Aretxabaleta, A., & Edwards, K. P. (2004). Modelling marine ecosystems and their environmental forcing. Marine Ecosystems and Climate Variation (pp. 33-64). New York: Oxford University Press.

2003

• Blanton, B. O., Aretxabaleta, A., Werner, F. E., & Seim, H. E. (2003). Monthly climatology of the continental shelf waters of the South Atlantic Bight. Journal of Geophysical Research, 108(C8), 20-1-19. doi: 10.1029/2002jc001609
• Seim, H. (2003). SEA-COOS: a model for a multi-state, multi-institutional regional observation system. Marine Technology Society Journal, 37(3), 92-101. doi: 10.4031/002533203787537249

2001

• Werner, F. E., Quinlan, J. A., Lough, R. G., & Lynch, D. R. (2001). Spatially-explicit individual based modeling of marine populations: a review of the advances in the 1990s. Sarsia, 86(6), 411-421.
• Werner, F. E., MacKenzie, B. R., Perry, R. I., Lough, R. G., Naimie, C. E., Blanton, B. O., & Quinlan, J. A. (2001). Larval trophodynamics, turbulence, and drift on Georges Bank: A sensitivity analysis of cod and haddock. Scientia Marina, 65, 99-115.
• Lynch, D. R., Lewis, C. V. W., & Werner, F. E. (2001). Can Georges Bank larval cod survive on a calanoid diet?. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 48(1-3), 609-630. doi: 10.1016/s0967-0645(00)00129-6
• Lynch, D. R., Naimie, C. E., Ip, J. T., Lewis, C. V., Werner, F. E., Luettich, R., ... Groman, R. C. (2001). Real-time data assimilative modeling on Georges Bank. Oceanography, 14. doi: 10.5670/oceanog.2001.50

2000

• Carlotti, F., Giske, J., & Werner, F. E. (2000). Modeling zooplankton dynamics. ICES zooplankton methodology manual (pp. 571-667). San Diego, Calif. ; London: Academic.

1999

• Churchill, J. H., Blanton, J. O., Hench, J. L., Luettich, R. A., & Werner, F. E. (1999). Flood tide circulation near Beaufort Inlet, North Carolina: Implications for larval recruitment. Estuaries, 22(4), 1057-1070. doi: 10.2307/1353083
• Checkley Jr., D. M., Ortner, P. B., Werner, F. E., Settle, L. R., & Cummings, S. R. (1999). Spawning habitat of the Atlantic menhaden in Onslow Bay, North Carolina. Fisheries Oceanography, 8, 22-36. doi: 10.1046/j.1365-2419.1999.00019.x
• Luettich, R. A., Hench, J. L., Fulcher, C. W., Werner, F. E., Blanton, B. O., & Churchill, J. H. (1999). Barotropic tidal and wind-driven larval transport in the vicinity of a barrier island inlet. Fisheries Oceanography, 8(Suppl. 2), 190-209. doi: 10.1046/j.1365-2419.1999.00030.x
• Stegmann, P. M., Quinlan, J. A., Werner, F. E., Blanton, B. O., & Berrien, P. (1999). Atlantic menhaden recruitment to a southern estuary: Defining potential spawning regions. Fisheries Oceanography, 8(Suppl. 2), 111-123. doi: 10.1046/j.1365-2419.1999.00022.x
• Hare, J. A., Quinlan, J. A., Werner, F. E., Blanton, B. O., Govoni, J. J., Forward, R. B., ... Hoss, D. E. (1999). Larval transport during winter in the SABRE study area: Results of a coupled vertical larval behaviour-three-dimensional circulation model. Fisheries Oceanography, 8(Suppl. 2), 57-76. doi: 10.1046/j.1365-2419.1999.00017.x
• Quinlan, J. A., Blanton, B. O., Miller, T. J., & Werner, F. E. (1999). From spawning grounds to the estuary: Using linked individual-based and hydrodynamic models to interpret patterns and processes in the oceanic phase of Atlantic menhaden Brevoortia tyrannus life history. Fisheries Oceanography, 8(Suppl. 2), 224-246. doi: 10.1046/j.1365-2419.1999.00033.x
• Blanton, J. O., Werner, F. E., Kapolnai, A., Blanton, B. O., Knott, D., & Wenner, E. L. (1999). Wind-generated transport of fictitious passive larvae into shallow tidal estuaries. Fisheries Oceanography, 8(Suppl. 2), 210-223. doi: 10.1046/j.1365-2419.1999.00024.x
• Werner, F. E., Blanton, B. O., Quinlan, J. A., & Luettich, R. A. (1999). Physical oceanography of the North Carolina continental shelf during the fall and winter seasons: Implications for the transport of larval menhaden. Fisheries Oceanography, 8(Suppl. 2), 7-21. doi: 10.1046/j.1365-2419.1999.00016.x

1998

• Greenberg, D. A., Werner, F. E., & Lynch, D. R. (1998). A diagnostic finite-element ocean circulation model in spherical-polar coordinates. Journal of Atmospheric and Oceanic Technology, 15(4), 942-958. doi: 10.1175/1520-0426(1998)015<0942:adfeoc>2.0.co;2

1997

• Hannah, C. G., Naimie, C. E., Loder, J. W., & Werner, F. E. (1997). Upper-ocean transport mechanisms from the Gulf of Maine to Georges Bank, with implications for Calanus supply. Continental Shelf Research, 17(15), 1887-1911. doi: 10.1016/s0278-4343(97)00048-4
• Werner, F. E., Quinlan, J. A., Blanton, B. O., & Luettich, R. A. (1997). The role of hydrodynamics in explaining variability in fish populations. Journal of Sea Research, 37(3-4), 195-212. doi: 10.1016/s1385-1101(97)00024-5
• MacKenzie, B. R., & Werner, F. E. (1997). Theme session on intermediate-scale physical processes and their influence on the transport and food environment of fish, 1995 - introduction. ICES Journal of Marine Science, 54(2), 159-159. doi: 10.1006/jmsc.1997.0227

1996

• Kapolnai, A., Werner, F. E., & Blanton, J. O. (1996). Circulation, mixing, and exchange processes in the vicinity of tidal inlets: A numerical study. Journal of Geophysical Research-Oceans, 101(C6), 14253-14268. doi: 10.1029/96jc00890
• Lynch, D. R., Ip, J. T. C., Naimie, C. E., & Werner, F. E. (1996). Comprehensive coastal circulation model with application to the Gulf of Maine. Continental Shelf Research, 16(7), 875-906. doi: 10.1016/0278-4343(95)00028-3
• Werner, F. E., Perry, R. I., Lough, R. G., & Naimie, C. E. (1996). Trophodynamic and advective influences on Georges Bank larval cod and haddock. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 43(7-8), 1793-1822. doi: 10.1016/s0967-0645(96)00042-2

1995

• Blanton, J., Wenner, E., Werner, F., & Knott, D. (1995). Effects of wind-generated coastal currents on the transport of blue crab megalopae on a shallow continental shelf. Bulletin of Marine Science, 57(3), 739-752.
• Lynch, D. R., Ip, J. T. C., Naimie, C. E., & Werner, F. E. (1995). Convergence studies of tidally-rectified circulation on Georges Bank. Quantitative skill assessment for coastal ocean models (pp. 153-174). Washington, DC: American Geophysical Union.
• Lynch, D. R., Ip, J. T. C., Werner, F. E., & Wolff, E. M. (1995). Environmental hydrodynamics: comprehensive model for the Gulf of Maine. Finite element modeling of environmental problems: surface and subsurface flow and transport (pp. 17-38). : J. Wiley & Sons Ltd..
• Werner, F. E. (1995). A 2-D field test case for tidally forced flows: a review of the tidal flow forum. Quantitative skill assessment for coastal ocean models (pp. 269-283). Washington, DC: American Geophysical Union.

1994

• Gross, T. F., & Werner, F. E. (1994). Residual circulations due to bottom roughness variability under tidal flows. Journal of Physical Oceanography, 24(7), 1494-1502. doi: 10.1175/1520-0485(1994)024<1494:rcdtbr>2.0.co;2
• Blanton, J., Werner, F., Kim, C., Atkinson, L., Lee, T., & Savidge, D. (1994). Transport and fate of low-density water in a coastal frontal zone. Continental Shelf Research, 14(4), 401-427. doi: 10.1016/0278-4343(94)90026-4
• Eckman, J. E., Werner, F. E., & Gross, T. F. (1994). Modeling some effects of behavior on larval settlement in a turbulent boundary layer. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 41(1), 185-208. doi: 10.1016/0967-0645(94)90067-1
• Tremblay, M. J., Loder, J. W., Werner, F. E., Naimie, C. E., Page, F. H., & Sinclair, M. M. (1994). Drift of sea scallop larvae Placopecten magellanicus on Georges Bank: a model study of the roles of mean advection, larval behavior and larval origin. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 41(1), 7-49. doi: 10.1016/0967-0645(94)90061-2
• Lough, R. G., Smith, W. G., Werner, F. E., Loder, J. W., Page, F. H., Hannah, C. G., ... Lynch, D. R. (1994). Influence of wind-driven advection on interannual variability in cod egg and larval distributions on Georges Bank - 1982 vs 1985. Cod and Climate Change - Proceedings of a Symposium (ICES Marine Science Symposia) (pp. 356-378). : .
• Tintore, J., Viudez, A., Gomis, D., Alonso, S., & Werner, F. E. (1994). Mesoscale variability and Q vector vertical motion in the Alboran Sea. Seasonal and interannual variability of the western Mediterranean Sea (pp. 47-72). Washington, DC: American Geophysical Union.

1993

• Werner, F. E., Blanton, J. O., Lynch, D. R., & Savidge, D. K. (1993). A numerical study of the continental shelf circulation of the U.S. South Atlantic Bight during the autumn of 1987. Continental Shelf Research, 13(8-9), 971-997. doi: 10.1016/0278-4343(93)90019-t
• Werner, F. E., Page, F. H., Lynch, D. R., Loder, J. W., Lough, R. G., Perry, R. I., ... Sinclair, M. M. (1993). Influences of mean advection and simple behavior on the distribution of cod and haddock early life stages on Georges Bank. Fisheries Oceanography, 2(2), 43-64. doi: 10.1111/j.1365-2419.1993.tb00120.x
• Werner, F. E., Viudez, A., & Tintore, J. (1993). An exploratory numerical study of the currents off the southern coast of Mallorca including the Cabrera Island complex. Journal of Marine Systems, 4(1), 45-66. doi: 10.1016/0924-7963(93)90019-i

1992

• Gross, T. F., Werner, F. E., & Eckman, J. E. (1992). Numerical modeling of larval settlement in turbulent bottom boundary layers. Journal of Marine Research, 50(4), 611-642. doi: 10.1357/002224092784797575
• Lynch, D. R., Werner, F. E., Greenberg, D. A., & Loder, J. W. (1992). Diagnostic model for baroclinic, wind-driven and tidal circulation in shallow seas. Continental Shelf Research, 12(1), 37-64. doi: 10.1016/0278-4343(92)90005-5

1991

• Johnsen, M., Paulsen, K. D., & Werner, F. E. (1991). Radiation boundary-conditions for finite-element solutions of generalized wave-equations. International Journal for Numerical Methods in Fluids, 12(8), 765-783. doi: 10.1002/fld.1650120806
• Lynch, D. R., & Werner, F. E. (1991). Three-dimensional hydrodynamics on finite elements. Part II: Non-linear time-stepping model. International Journal for Numerical Methods in Fluids, 12(6), 507-533. doi: 10.1002/fld.1650120602
• Walters, R. A., & Werner, F. E. (1991). Nonlinear generation of overtides, compound tides, and residuals. Tidal hydrodynamics (pp. 297-320). New York: J. Wiley.
• Lynch, D. R., & Werner, F. E. (1991). Three-dimensional velocities from a finite element model of English Channel/Southern Bight tides. Tidal hydrodynamics (pp. 183-200). New York: J. Wiley.

1990

• Lynch, D. R., Werner, F. E., Molines, J. M., & Fornerino, M. (1990). Tidal dynamics in a coupled ocean/lake system. Estuarine Coastal and Shelf Science, 31(3), 319-343. doi: 10.1016/0272-7714(90)90107-3

1989

• Walters, R. A., & Werner, F. E. (1989). A comparison of 2 finite-element models of tidal hydrodynamics using a North Sea data set. Advances in Water Resources, 12(4), 184-193. doi: 10.1016/0309-1708(89)90022-5
• Werner, F. E., & Lynch, D. R. (1989). Harmonic structure of English Channel/Southern Bight tides from a wave equation simulation. Advances in Water Resources, 12(3), 121-142. doi: 10.1016/0309-1708(89)90018-3

1988

• Werner, F. E., Cantosfiguerola, A., & Parrilla, G. (1988). A sensitivity study of reduced-gravity channel flows with application to the Alboran Sea. Journal of Physical Oceanography, 18(2), 373-383. doi: 10.1175/1520-0485(1988)018<0373:assorg>2.0.co;2

1987

• Werner, F. E., & Lynch, D. R. (1987). Field verification of Wave Equation tidal dynamics in the English Channel and southern North Sea. Advances in Water Resources, 10(3), 115-130. doi: 10.1016/0309-1708(87)90018-2
• Lynch, D. R., & Werner, F. E. (1987). Three-dimensional hydrodynamics on finite elements. Part I: Linearized harmonic model. International Journal for Numerical Methods in Fluids, 7(9), 871-909. doi: 10.1002/fld.1650070902
• Werner, F. E. (1987). A numerical study of secondary flows over continental shelf edges. Continental Shelf Research, 7(4), 379-409. doi: 10.1016/0278-4343(87)90107-5

1985

• Werner, F. E., & Walters, R. A. (1985). Spin-up of a rotating homogeneous fluid. Finite Elements in Fluids (pp. 219-232). Washington D.C.: J. Wiley & Sons.

1983

• Werner, F. E., & Hickey, B. M. (1983). The role of a longshore pressure gradient in Pacific Northwest coastal dynamics. Journal of Physical Oceanography, 13(3), 395-410. doi: 10.1175/1520-0485(1983)013<0395:troalp>2.0.co;2